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Single-cell RNA-seq (10X Genomics Chromium) of MGE, CGE, cortical and subcortical regions of E13.5, E18.5 and P10 mice

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Single-cell RNA-seq to profile a developmental time course of interneuron development, measuring the transcriptomes of progenitors during their maturation in the ganglionic eminences. Lhx6-GFP mice were used for E13.5 samples; for later stages, when cells have migrated out of the GEs, we used a Dlx6a-Cre; RCEloxP pan- GE fate mapping strategy to collect cortical interneurons at E18.5 and P10.

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