Borrelia Strain Diversity

Simulated sequence data for testing Bb strain diversity method, all in FASTQ format. Included are read sets from 3 whole genomes (B31, JD1, N40) x 10 replicates of each. B31_01_R1.fq.bz1 (Genome B31, replicate 1, read 1). These files are compressed with http://www.linfo.org/bzip2.html and can be decompressed with bzip2 -d <em>file.bz2 . </em> Also included are reads from all 32 ospC types and subtypes (single replicate of each, uncompressed). Mixes of reads from ospC types are also included. They are named according to the genotypes and fractions they contain: BA.01.99_ospC_1.fq is 1% ospC type B, 99% ospC type A for example, and contains the 1st read pair of the paired FASTQ reads (the paired reads are in the file BA.01.99_ospC_2.fq).