Analysis Data and Stardist3D Trained Weights for Whole-mount Gastruloid Deep Imaging and Multiscale Analysis

This archive is associated to the publication"Gros, A., Vanaret, J., Dunsing-Eichenauer, V., Rostan, A., Roudot, P., Lenne, P.F., Guignard, L. and Tlili, S., 2024. A quantitative pipeline for whole-mount deep imaging and multiscale analysis of gastruloids. bioRxiv, pp.2024-08"with DOI https://doi.org/10.1101/2024.08.13.607832 It contains the following zip files: - "zenodo_tapenade_data.zip" which contains all datasets used to reproduce the figures of the articles, the trained Stardist3D weights, and the associated training datasets. - "stardist_tapenade_model.zip" which contains the trained Stardist3D weights