Additional file 3 of Spatial host-microbiome profiling demonstrates bacterial-associated host transcriptional alterations in pediatric ileal Crohn’s disease

Additional file 3: Supplementary Table S1. Baseline clinical, laboratory, and endoscopic characteristics of pediatric CD patients and IBS control subjects. Supplementary Table S2. Bacterial relative risk analysis for reduced cell viability in pediatric Crohn's disease. Supplementary Table S3. Previous literature reports of bacterial associations with Crohn's disease risk according to Gevers et al. (2014) and Kansal et al. (2019). Supplementary Table S4. Strain-level bacterial relative risk values for reduced cell viability in pediatric Crohn's disease.