Additional file 10 of FixNCut: single-cell genomics through reversible tissue fixation and dissociation
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Additional file 10: Table 9. This table contains the results of gene set enrichment analysis (GSEA) for fixed/cryo versus cryo mouse lung samples, by cell population. The analysis was performed using the fgsea package with multiple gene sets from MSigDB. Gene sets containing within 10-300 genes were included and the obtained results were considered significant if the FDR adjusted p-value was <0.05 and if >5 genes overlapped with the gene set, representing >15% of the gene set (see Methods).
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2024-08-15



