Data from: Desert ecosystems shape diversification in glossy snakes (genus Arizona) requiring a re-alignment of evolutionary and conservation units
收藏资源简介:
Provided are several input data files for the various analyses that were used in the article. Specific file information arel.longtail.R80.ped & arel.longtail.R80.map = plink files of SNP data of "Long-tailed group" for Admixture analysis. arel.sanjoaquin.R80.ped & arel.sanjoaquin.R80.map = plink files of SNP data of "San Joaquin cluster" for Admixture analysis. arel.shortail.R80.ped & arel.shortail.R80.map = plink files of SNP data of "Short-tailed group" for Admixture analysis. arel.R80.81ind.phylip = genotype data in phylip format for RaxML analysis. arel.phylo81.ped & arel.phylo81.map = plink files of SNP data of samples used in RaxML for Admixture analysis. arel_44ind_1000_loci.phy = nuclear alignments for BPP (MSC-M) analysis with 1000 loci. arel_44ind_2500_lociv3.phy = nuclear alignments for BPP (MSC-M) analysis with 2500 loci. arel_30_all_loci_bpp.phy = nuclear alignments for BPP (MSC) analysis with 1000 loci. alignment_nd1_4_v2.nex = concatenated mtDNA dataset alignment in nexus format.



