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Kipoi ensemble model without conservation. The used models are - MaxEntScan/3prime, MaxEntScan/5primet, labranchor, HAL
应用场景：
创建时间：
2020-01-24
相关数据集
Additional file 1: of A high-performance approach for predicting donor splice sites based on short window size and imbalanced large samples
Table S1. The table lists 201 decision rules obtained based on HS3D-train1:135, and lists the number of positive and negative training samples conforming to the decision rules. (XLSX 38 kb)
Figshare2024-02-09 更新40
Cleaning the GenBank Arabidopsis thaliana data set.
Data driven computational biology relies on the large quantities of genomic data stored in international sequence data banks. However, the possibilities are drastically impaired if the stored data is
PubMed Central1996-01-15 更新30
Results for the analysis of the coding potential of pX region ORFs in various strains of HTLV-1/STLV-1.
All predictions are based on sites aligning to the annotated sites of interest in the reference sequence (AF033817); alternative sites for splicing or translation initiation were not considered in thi
Figshare2025-05-09 更新30
Annotation Tool Comparison.
Prediction refers to a determination of functional effect of a specific variant type—not simply whether the variant belongs to that type. Splice-site variant effect prediction refers only to non-donor
NIAID Data Ecosystem40
Genome-Wide Association between Branch Point Properties and Alternative Splicing
The branch point (BP) is one of the three obligatory signals required for pre-mRNA splicing. In mammals, the degeneracy of the motif combined with the lack of a large set of experimentally verified BP
NIAID Data Ecosystem30
