Supplemental Material for Macdonald and Long, 2022

Analysis The "malathion_analysis.zip" zipped file resolves to a series of R/shellscripts and required files enabling the reproduction of the analysis in the study. Supplementary Text/Figures The "supp_2022_09_20.pdf" includes supplementary figures S1 and S2, supplementary text S1, and the legend for supplementary table S1 (available for separate download). Supplementary Table S1 This text file ("Supplementary_Table_S1.txt") contains all details on the genes within the mapped QTL intervals. Its legend is presented in "supp_2022_09_20.pdf". Haplotypes The "malathion_haps_genetic_1p5cM.txt.gz" gunzipped text file holds the founder haplotype calls at a series of genetic positions along the genome for several mixed, sequenced populations. Along with the scripts (see "malathion_analysis.zip"), these data can be used to recreate the figures from the study without starting from scratch (i.e., with raw reads from the SRA).