Dataset for "A Comparative Review of Deep Learning Methods for RNA Tertiary Structure Prediction"

Datasets used in "A Comparative Review of Deep Learning Methods for RNA Tertiary Structure Prediction".

The provided zip file contains:

Datasets 1–3: For each dataset, directories include input sequences (FASTA), multiple sequence alignments (MSAs in AFA format), and normalized predicted structures from six deep learning tools. Dataset 3 also contains references - RNA chains extracted from complexes (based on the original PDB files).

Dataset 4: A text file listing the PDB IDs of RNAs included in this dataset, which is a subset of Dataset 3.

Complex Predictions: RNA chains extracted from predicted complexes, where predictions are made by AlphaFold3 and, in some cases, RoseTTAFoldNA.

The structure of the dataset and details of each folder are explained in the included README file.