Additional file 6 of Mechanism of efficacy of trabectedin against myxoid liposarcoma entails detachment of the FUS-DDIT3 transcription factor from its DNA binding sites

Additional file 6: Table S6. Differentially bound peaks (DBPs) of the ML017 model from the comparison ET-24h vs CTRL (sheet name reported as ET-24 vs CTRL), ET-72h vs CTRL (sheet name reported as ET-72 vs CTRL), and ET-15d vs CTRL (sheet name reported as ET-15 vs CTRL). For each sheet name columns legend is as follows: Chrom, chromosome; start and end indicate the starting and the ending position of the consensus peak; width indicate the extension of the consensus peak in bp; Conc is the mean read concentration over all the samples, i.e. log2 normalized ChIP read counts with read of the reference control sample subtracted; Conc_ML017_ET-24/ET-72/ET-15, mean read concentration over the selected condition; Conc_ML017_ctrl, mean read concentration over the ML017 at basal conditions; Fold represents the differences in mean concentration between the compared groups; p.value is the significance of the comparison; FDR is the false discovery rate corrected p-value; annotation indicates the genomic region associated with the consensus peak; geneStart and geneEnd represent the starting and the ending position of the annotated gene; geneLength is the length of the annotated gene; geneStrand represents the reading strand of the annotated gene, 1 for forward, 2 for reverse; geneID is the official Entrez identifier of the annotated gene; distanceToTSS indicates the distance in bp from the transcription start site (TSS) of the annotated gene; ENSEMBL is the official ENSEMBL identifier associated with the annotated gene; SYMBOL is the official HUGO gene symbol identifier for the annotated gene; GENENAME is the official gene name of the annotated gene. See attached excel file.