BV-BRC genome_amr records for isoniazid and rifampin: the Mycobacterium tuberculosis extract used in a provenance audit (2026-09-22) and an all-taxa API snapshot (2026-09-27)

Correction notice: In this version's 2026-09-22 amr_isoniazid_full.csv and amr_rifampin_full.csv, genome identifiers were stored as numbers, causing some trailing zeros to be lost and records to be assigned to incorrect genomes. Do not treat these files as a faithful copy of BV-BRC; see Version 2 for the integrity check and corrected interpretation. Two extracts of the public BV-BRC genome_amr table for isoniazid and rifampin, archived so that a provenance audit of Mycobacterium tuberculosis drug-susceptibility records remains reproducible when the live database changes. Both extracts contain laboratory-method phenotypes and computational-method predictions as served by BV-BRC; the audit uses laboratory-method records only. frozen_extract_2026-09-22/: the extract analysed in the audit, restricted to M. tuberculosis genomes (genome_id prefixes 1773. and 1733.), with genome metadata. The query used then cannot be re-run on the current API, and comparison with the 2026-09-27 snapshot shows records with insertion dates before 2026-09-22 that are absent from it, so it should not be treated as a complete copy of the table on that date. It is archived because it is the exact input of the audit. pre_reply_snapshot_2026-09-27/: every genome_amr record for isoniazid (163,970) and rifampin (167,030) across all taxa, with all API fields including record identifiers and insertion/modification dates; genome metadata for the genomes discussed with database maintainers; the pull script and manifest; and a comparison of the two extracts restricted to the same scope. Differences between the extracts are not counts of database insertions or deletions: they may reflect how the 2026-09-22 extract was obtained as well as changes to the database. The snapshot was taken on 2026-09-27 (03:34 UTC), the day the authors sent factual-verification requests to the maintainers of BV-BRC, the CRyPTIC Consortium Dataset and the Hu et al. (2024) AMR benchmark. No values were edited. SHA256SUMS.txt gives a SHA-256 checksum for every other file in the archive. Zenodo stores files without folders, so each file name carries its folder as a prefix (folder__file).