Test dataset for the Genome Evaluation Pipeline (GEP)
收藏NIAID Data Ecosystem2026-05-02 收录
下载链接：
https://zenodo.org/record/14976498
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资源简介：
This is a dataset of small genomes and subset of reads for testing.
The Algae dataset (algae.tar) is compsosed of the assembly and a subset of sequencing reads of Marvania coccoides (BioProject Accession PRJEB68020).- algae/GCA_963694935.1_pri.fa.gz- algae/GCA_963694935.1_alt.fa.gz- algae/hic/ERR12245615_sub10M_1.fq.gz- algae/hic/ERR12245615_sub10M_2.fq.gz- algae/hifi/ERR12205286_sub50k.fq.gz
The Bacteria dataset (bacteria.tar) is compsosed of the assemblies and subsets of sequencing reads of Escherichia coli (BioProject Accessions PRJEB30511, PRJNA288601, and PRJNA739030).- bacteria/asm_hifi.fa.gz- bacteria/asm_ont.fa.gz- bacteria/asm_short.fa.gz- bacteria/hifi/SRR15291770_sub50k.fq.gz- bacteria/ont/ERR3284704_sub50k.fq.gz- bacteria/short/SRR32136800_sub2M_1.fq.gz- bacteria/short/SRR32136800_sub2M_2.fq.gz
创建时间：
2025-03-13
