Models generated by Alphafold2

All the AlphaFold models predicted for interacting and non-interacting proteins pairs used in the article : "AlphaFold2 predicts interactions amidst confounding structural compatibility". The archive contains two directories: INPUT_SEQUENCES : the input sequences AF2_OUTPUT: the resulting models generated by AlphaFold2. This directory contains 3 directories: MSA_DEFAULT : models generated with the MSA default pairing option "pair_mode": "unpaired_paired", with recycling MSA_PAIRED : models generated with the MSA pairing option "pair_mode": "paired" and no recycling MSA_UNPAIRED : models generated with the MSA pairing option "pair_mode": "unpaired" and no recycling