Data for "A systematic evaluation of interneuron morphology representations for cell type discrimination"

This folder contains all the data to reproduce the figures of the publication A systematic evaluation of interneuron morphology representations for cell type discrimination (https://doi.org/10.1101/591370).

statistic_descriptions.csv : links each feature's statistic_id with a short description

classification: This folder holds the multi-class and the pairwise classification performances of all feature representations (relevant for figure 4 and figure 5). It also holds the pickled multi-class models trained on morphometric statistics which coefficients are visualized in figure S5.

embedding_data: This folder holds all the data used for the t-SNE visualizations of figure 8 and S4.

features: This folder holds all computed feature representations of each data set and each modality (full, axon, dendrite). Features are indexed by a statistic id. Some example features are shown in figure 2. Careful, this folder is large (~6GB)!

reconstructions: This folder contains all the neural reconstructions used for figure 1.