This repository contains the toy dataset and R code that was used in analyses in paper titled "DD-CC-II: Data Driven Cell-Cell Interaction Inference and Its Application to COVID-19".
E14_fev_lineage_monocle_ob - Resulting monocle objected generated from E14_fev_lineage_endocrine_seur_ob. Used monocle_lineage_trace.R script. Grouped by "res.1.4" in phenoData. Corresponds to Fig. 7a
The Community package (https://github.com/SoloveyMaria/community) is an R package designed for the analysis of single-cell RNA sequencing data, specifically for inferring interactions between differen
The Community package (https://github.com/SoloveyMaria/community) is an R package designed for the analysis of single-cell RNA sequencing data, specifically for inferring interactions between differen
