MOESM2 of Impact of merging commercial breeding lines on the genetic diversity of Landrace pigs

Additional file 2: Table S1. Outlier SNPs identified (q-value ≤ 0.05) by BayeScan in the pairwise comparison between the current TN and the six former lines. SNP ID, SNP identifier; Chromosome, chromosome number; Position, position on the chromosome; prob, posterior probabilities; log10(PO), the logarithm to 10 of Posterior Odds; qval, q-value the threshold for significance of signatures of selection; alpha, a locus-specific component indicating the strength and direction of selection, a positive value of alpha suggests diversifying selection, whereas negative values suggest balancing or purifying selection; fst, fixation index; RS ID, accession number of the SNP; Gene Name (5 kb upstream/downstream), name of a gene that is located within 10 kb (5 kb downstream/upstream) of the SNP outlier; GO BP (GO-slim), Gene Ontology slim biological process term; General Term GO BP, general Gene Ontology biological process term.