Table 2 in A comprehensive multigene phylogeny of Phylloporia (Hymenochaetaceae, Basidiomycota), with an emphasis on tropical African species

Table 2. Summary of data sets used for phylogenetic inferences. PropertiesTEF-1αTEF-1αLSURPB2RPB2Introns1 st & 2 nd3 rd1 st & 2 nd3 rdAlignment size592296995524262292Excluded characters——167———Model selectedGTR+I+GGTR+GGTR+I+GHKY+I+GGTR+I+GGTR+I+G-Likelihood score Base frequencies3.250.91566.952.549158.480.47922.536.92455.748.05757.160.884Freq. A0.30870.14810.23810.29300.25770.2337Freq. C0.20990.28390.16290.22240.21450.2105Freq. G0.27830.30130.32450.26130.26690.2110Freq. T0.20310.26670.27450.22330.26100.3448Proportion of invariable sites0.5357—0.39630.61980.06890.1118Gamma shape0.534432.4550.64930.774791.62046.204Test of substitution saturation1Iss0.4840.5010.7110.2410.3790.618Iss.cSym0.7120.6830.8020.7050.6820.724P (Sym)<0.0001<0.0001<0.0001<0.0001<0.0001<0.0001Iss.cAsym0.3840.3540.4420.3780.4650.769P (Asym)<0.0001<0.0001<0.0001<0.0001<0.0001<0.0001 1 Iss: index of substitution saturation. Iss.cSym: critical value for symmetrical tree topology. Iss.cAsym: critical value for extremely assymetrical tree topology. P: probability that Iss is significantly different from the critical value (Iss.cSym or Iss.cAsym).