Static String PPI data for PTMsToPathways package

These are static files that can be used with the PTMsToPathways R package if the databases (String, GeneMANIA, and PhosphositePlus) are down. string_hs_hugo.tsv: Mirrors the column structure of GetSTRINGdb.edges() within the PTMsToPathways package.source | target | interaction | Weight This data is created by the script scripts/string_to_hugo.r within the PTMsToPathways package. STRING data is shareable via a CC BY 4.0 license. hs_interactions_hugo.tsv: GeneMANIA Homo sapiens interaction network downloadGroups: Physical Interactions, Predicted, Pathway, Genetic InteractionsOutput: TSV with HUGO gene symbols + edge weights + metadata This data is created by the script scripts/genemania_hs_download.r within the PTMsToPathways package. Kinase_Substrate_Dataset.txt This dataset is derived from PhosphoSitePlus data licensed under CC BY-NC-SA 3.0. The processed dataset is distributed under the same license. Attribution to PhosphoSitePlus and the associated publication is required.