Supplemental data 3
收藏DataCite Commons2020-12-01 更新2024-07-28 收录
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https://figshare.com/articles/dataset/Supplemental_data_3/12264737
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资源简介：
Lists of up- and down- differentially expressed genes (DEGs) between one S-strain (Izumo-87: “IS” in this data) and five R-strains (VN09-1, VN09-3_F<sub>24</sub>, IxV-F<sub>1</sub>, Vxl-F<sub>1</sub> and KR-14: described as “VR”, “IxV-F1”, “IxV-F1”, “V09-24-R”, “KR” in this data, respectively). The list contain representative isoform ID (Repr isoform id: most abundant isoform in the gene), top hit gene functional annotation in NCBI-nr with Accession ID and Description and and Pfam database, FDR values, FDR rank (this rank was based on up- plus down- DEG list), A-value and M-value by iDEGES/edgeR and tag count of each sample normalized by iDEGES/edgeR (columns of “IS”, “VR”, “V09-24-R”, “IxV-F1”, “Vxl-F1” and “KR”). Detailed explanation of A-value, M-value and the tag count were in Sun et al., 2013 and TCC Bioconductor document (https://bioconductor.org/packages/release/bioc/html/TCC.html). <br>
提供机构：
figshare
创建时间：
2020-05-07
