Data Supplement 2 from Differential Burden of Rare and Common Variants on Tumor Characteristics, Survival, and Mode of Detection in Breast Cancer

Table S1 describes primer sequences and amplicon details. Table S2 summarizes percent callable bases and depth summary for the dataset. Table S3 lists the criteria for the hard filtering of variant calls. Table S4 shows a list of common variants used in the construction of the breast cancer polygenic risk scores. Table S5 shows a summary of 649 protein-truncating variants by gene in 597 unique samples. Table S6 tabulates protein-truncating variants and carrier counts.