SHSY5Y_differentiation_datafiles
收藏NIAID Data Ecosystem2026-03-13 收录
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https://zenodo.org/record/4727856
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资源简介：
SHSY5Y_differentiation_datafiles is a directory of data accompanying the manuscript:
Long read sequencing reveals novel isoforms and insights into splicing regulation during cell state changes
David J Wright1, Nicola Hall2,3, Naomi Irish1, Angela L Man1, Will Glynn1, Arne Mould2,3, Alejandro De Los Angeles2,3, Emily Angiolini1, David Swarbreck1, Karim Gharbi1, Elizabeth M Tunbridge2,3, Wilfried Haerty1*
1Earlham Institute, Norwich Research Park, Norfolk NR4 7UZ, UK
2Department of Psychiatry, Medical Sciences Division, University of Oxford, Oxfordshire OX3 3JX, UK
3Oxford Health NHS Foundation Trust, Oxford, Oxfordshire OX3 7JX, UK
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It consists of subdirectories of differential expression (DE), differential transcript usage (DTU), synthetic spike-in assessments (SEQUINS), a gene specific case study (CACNA2D2) and a custom annotation GTF and corresponding transcriptome fasta (ANNOTATION), along with a README.txt describing contents. These data are accompanied by the corresponding analysis scripts that can be accessed from: https://github.com/TGAC/SHSY5Y_differentiation.
创建时间：
2022-04-05
