Structural rearrangement breakpoints.

Base pair resolution breakpoint obtained by sequencing a PCR amplified junction fragment; deletion details any loss of sequence associated with the breakpoint;
▪indicates breakpoint was not PCR verified so position is not accurate to base pair resolution;
•indicates the rearrangement was only detected in paired-sequence read data obtained in large insert libraries,
††indicates breakpoint is between 24880910 and 24880958,
*indicates insertion that’s only known homology is with an un-mapped region on human chromosome 4 (chr4_gl000194_random, 90017–190455), Un indicates bases of unknown origin,
**indicates chr21 9826532–9826580,
▴indicates bases 23648470–23648476 appear in 2 breakpoint junction fragments,
†indicates bases 23306917–23306930 appear in 2 breakpoint junction fragments,
♦indicates AT repeat at the breakpoint is most likely to come from the 44314438 side of the breakpoint. Underlined bases are inserted at the breakpoint. Bold bases could originate from either reference sequence.