S1 File - Antibiotic Susceptibility Profiles of Dairy Leuconostoc, Analysis of the Genetic Basis of Atypical Resistances and Transfer of Genes In Vitro and in a Food Matrix

Source of isolation of the Leuconostoc-Weissella strains of this study (Table A). Primers and positive control strains used for the detection of antibiotic resistant genes (Table B). Primers and conditions used for the identification of dairy Leuconostoc-Weissella (Table C). GenBank accession numbers for nucleotide sequences of the genes atpA and pheS used for the phylogenetic analyses (Table D). Phylogenetic tree obtained from the concatenated atpA and pheS gene sequences of the four Leuconostoc strains showing atypical AR profiles and 12 Leuconostoc type strains with L. fallax LMG 13177T as an outgroup. The tree was reconstructed by using maximum composite likelihood method. Bootstrap values (1,000 replicates) are shown as a percentage at the branching points. The scale bar represents the number of nucleotide substitutions per site (Fig A). (DOCX)