AlphaFold 3 predictions of diubiquitin complexes using cysteine mutants and bonded linkers
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Alphafold 3 predictions of PDB structures* 5ymy* 6isu* 6tuv* 6ud0* 7keo* 7m4n* 7uyh* 9avt* 7uv5* 8c61* 8j1pusing standard AF3 / correlated cysteine mutations / covalent linkers, as well as* structure of a branched polyUb chain* rpn1 in complex with triUb* rpn13 in complex with triUb For processing with the scripts available at https://github.com/bio-phys/polyUb-AF, the AF3 CIF files must be converted to PDBs using the 'convert_all_cif_to_pdb.sh' VMD script found in each directory. Note that it requires 'cif2pdb.vmd'.
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Zenodo创建时间：
2025-05-27
