visium_data_ATG7 cKO, ATG7 cWT (raw data files)

NIAID Data Ecosystem2026-05-02 收录

空间转录组学

基因功能研究

数据链接：

https://zenodo.org/record/11164934 数据链接链接失效反馈

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资源简介：

Raw files ( Atg7 cKO : CR_23_15193_FP_R_SSV_.fastq.gz, Atg7 cWT : CR_23_15194_FP_R_SSV_.fastq.gz)

创建时间：

2025-02-16

GeoMx Cancer Transcriptome Atlas (CTA) mRNA assay on 191 ROIs from a NSCLC tumor. [NSCLC_191_grid]

空间转录组学

肿瘤微环境细胞解卷积

Dense spatial gene expression profiling of a NSCLC tumor. This study was part of Danaher & Kim et al., "Advances in mixed cell deconvolution enable quantification of cell types in spatially resolved g

NIAID Data Ecosystem50

Table about the genetic networks of C.elegans with positional information.

线虫基因调控网络

空间转录组学

Table about the genetic networks of C.elegans with positional information.

NIAID Data Ecosystem00

Additional file 9 of Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

空间转录组学

肿瘤微环境细胞相互作用

Additional file 9: Table S1. A list of gene markers for macrophages when near tumor cells as opposed to hepatocytes as found by niche-DE. Table S2. A list of gene markers for macrophages when hepatocy

NIAID Data Ecosystem00

The paired primers used for gene cloning, disruption, complement, silencing and expression.

基因功能研究

分子克隆

*H = A, C or T; B = C, G or T; V = A, C or G; R = A or G. The enzyme sites are italicized while the gateway fragments for exchange are in bold.

Figshare2015-12-02 更新00

biopsy_spatial_CosMx.h5ad

空间转录组学

溃疡性结肠炎

CosMx 960-plex RNA-ISH dataset of formalin-fixed, paraffin-embedded (FFPE) colon biopsies from healthy controls and patients with ulcerative colitis on aminosalicylates or vedolizumab. Addendum 8/29/2

NIAID Data Ecosystem00

visium_data_ATG7 cKO, ATG7 cWT (raw data files)

资源简介：

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