Genes regulated by RAO-status with further dependencies on stimulating agent and/or cohort.

For every effect the number of DE genes and the top ten DE genes are listed. The overall “conditionRAO” effect includes significant genes due to the RAO effect in at least one cohort and stimulation. Mock-stimulated samples from control horses of the Unrelated cohort were used as a reference group. Baseline “conditionRAO” effect represents differences between RAO and control samples from the Unrelated unstimulated group. Colons “:” indicate an interaction effect, e.g. “conditionRAO:Family1” effect represents differential changes in the RAO effect in Family 1 in mock compared to RAO effect in Unrelated group in mock.