EUKulele databases for Phaeocystis mapping (Krinos et al. 2023)
收藏资源简介：
Supplementary dataset for Krinos et al. 2023, Missing microbial eukaryotes and misleading meta-omic conclusions, <em>bioRxiv</em>. Each zipped folder is a different database containing some subset of the <em>Phaeocystis</em> references used to map against the <em>Tara</em> Oceans metagenomes. These folders contain a combined database and taxonomy table derived from other sequencing dataset resources which can be used directly with the EUKulele software. `marmmetsp_all_phaeo.tar.gz` - full database including MarRef, MMETSP (Keeling et al. 2014), and all <em>Phaeocystis</em> references as listed in Krinos et al. (2023) `marmmetsp_all_colonies.tar.gz` - database including MarRef, MMETSP (Keeling et al. 2014), and <em>Phaeocystis</em> references known to form colonies (<em>Phaeocystis antarctica</em>, <em>Phaeocystis pouchetii</em>, <em>Phaeocystis globosa</em>) `marmmetsp_all_free.tar.gz` - database including MarRef, MMETSP (Keeling et al. 2014), and <em>Phaeocystis</em> references known <strong>not</strong> to form colonies (<em>Phaeocystis rex</em>, <em>Phaeocystis jahnii</em>, <em>Phaeocystis cordata</em>)
