Erythranthe cardinalis Raw sequence reads

Here we study the spatiotemporal genomics of Mimulus (Erythranthe) cardinalis across most of its native range in California and Oregon. 55 populations have been sequenced up to 10 individuals per population spanning an aridity gradient. 12 of these populations have been sequenced yearly from 2010 to 2016 during a period of exceptional drought with some occasional gaps in the timeseries. This data is used to carry out genome environment association mapping (GEA) to identify climate associated SNPs. We then track the change of these SNPs over the timeseries to understand if rapid evolution of putatively adapted SNPs/regions of the genome increase towards the climate change adapted allele. All data included is Illumina whole genome sequencing data sequenced at 6 to 21X coverage.