Tocilizumab models and data

n this zipped folder are two folders: data and results data data contains two subfolders: bulk_data single_cell_data bulk_data has the processed bulk data for tocilizumab analysis (Rivellese et al. Rituximab versus tocilizumab in rheumatoid arthritis: synovial biopsy-based biomarker analysis of the phase 4 R4RA randomized trial) original data can be found here: https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-11611) single_cell_data has the processed single-cell data and the generated pseudobulks used by BuDDI. Within this folder, augmented_* contains the pseudobulks results This folder contains several results folders. Each one is specific to an experiment and a model. The naming convention is "model_experiment"buddiM2: the BuDDI modelbp: BayesPrismcibsersort: CIBERSORTx