Supplementary Files – Dissecting the genomic regions that underpin the genetic correlations between production, fertility, and urea traits

Supplementary File 1. The number of windows, chromosome number, chromosome coordinates, local correlation estimates, pvalues and status of each window for production vs fertility trait pairs (Table S1-S3). Supplementary File 2. The chromosome number and chromosome coordinates of windows consistently tagged as drivers across production vs fertility trait pairs (Table S4). Supplementary File 3. The QTL enriched for the driver regions for production vs fertility trait pairs (Table S5). Supplementary File 4. The chromosome number and chromosome coordinates of windows consistently tagged as antagonizers across production vs fertility trait pairs (Table S6) Supplementary File 5. The genome-wide plots of the meta-analysis (two-trait and multi-trait) and the QTL enrichment between the production and fertility trait pairs (Figure S1-S3) Supplementary File 6. The number of windows, chromosome number, chromosome coordinates, local correlation estimates, pvalues and status of each window for urea vs fertility trait pairs (Table S7-S8) Supplementary File 7. The chromosome number and chromosome coordinates of windows consistently tagged as drivers across urea vs fertility trait pairs (Table S9). Supplementary File 8. The QTL enriched for the driver regions for urea vs fertility trait pairs (Table S10). Supplementary File 9. The chromosome number and chromosome coordinates of windows consistently tagged as antagonizers across urea vs fertility trait pairs (Table S11) Supplementary File 10. The QTL enriched for the antagonizer regions for urea vs fertility trait pairs (Table S12). Supplementary File 11. The genome-wide plots of the meta-analysis (two-trait and multi-trait) and the QTL enrichment between urea and fertility trait pairs (Figure S4-S6) Supplementary File 12. The number of windows, chromosome number, chromosome coordinates, local correlation estimates, pvalues and status of each window for urea vs production trait pairs (Table S13-S18). Supplementary File 13. The chromosome number and chromosome coordinates of windows consistently tagged as drivers across urea vs production trait pairs (Table S19). Supplementary File 14. The QTL enriched for the driver regions for urea vs production trait pairs (Table S20). Supplementary File 15. The chromosome number and chromosome coordinates of windows consistently tagged as antagonizers across urea vs production trait pairs (Table S21). Supplementary File 16. The genome-wide plots of the meta-analysis (two-trait and multi-trait) and the QTL enrichment between urea and production trait pairs (Figure S7-S10)