five

Heatmaps of orthology and protein domain preservation in RNA Processing complexes throughout the fungal kingdom

收藏
NIAID Data Ecosystem2026-05-02 收录
下载链接:
https://zenodo.org/records/47641
下载链接
链接失效反馈
官方服务:
资源简介:
An analysis of the presence/absence of orthologues for Fungal RNA Processing protein complexes, and the presence/absence of the known PFAM protein domains within each protein within these complexes in the organism's proteome.   Each image represents one RNA Processing protein complex. Orthology (far left panel in each image) is relative to Yeast, and taken from a query against the EnsEMBL orthology database (black = no orthologue; red = orthologue).   Each orthologue was then queried for its PFAM domains, and the non-redundant set of PFAM domains representing each set of orthologous proteins, spanning all species, was then scanned against the complete proteome of each species.  The resulting heatmap indicates the presence or absence of that PFAM domain anywhere in the proteome of that species.  (black = absent; red = 1 copy; grey->blue = more than one copy)
创建时间:
2024-08-04
二维码
社区交流群
二维码
科研交流群
商业服务