Summary table of gut content DNA sequencing
收藏DataONE2013-06-19 更新2024-06-27 收录
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The table presents the number of sequences per OTU and per sample (fish gut). Sequence clustering was done using CROP. OTUs were identified from BLASTn searches performed in the Moorea BIOCODE database and GENBANK. We provide BIOCODE specimen number and/or GenBank accession number in the table whenever sequence similarity to a reference barcode was >98%. Additional information on BIOCODE specimen can be obtained from http://biocode.berkeley.edu/. When sequence similarity was <98%, we used the Bayesian assignment tool implemented in SAP to assign each OTU to a higher taxonomic group, accepting assignments at a significance level of 95% (posterior probability). Note that the representative sequence for each OTU is provided as a supplementary file in the manuscript.
创建时间:
2013-06-19



