Mycobacteriaceae database for mashID - 2025-02-20 update

Updated database to identify Mycobacteriaceae using mashID (https://github.com/duceppemo/mashID).26,101 genomes were downloaded using the NCBI datasets cli tool (https://www.ncbi.nlm.nih.gov/datasets/docs/v2/command-line-tools/download-and-install/).Downloaded genomes were renamed and binned by species (https://github.com/duceppemo/ncbi/blob/master/rename_and_bin_fasta.py)Genomes were dereplicated by species using a 0.1% similarity threshold (https://github.com/rrwick/Assembly-Dereplicator)