Additional file 2 of Metagenomics-resolved genomics provides novel insights into chitin turnover, metabolic specialization, and niche partitioning in the octocoral microbiome

Additional file 2: Table S1. General genomic features, taxonomic classification and genome assembly accession numbers of each of the 66 metagenome-assembled genomes (MAGs) obtained from octocoral- and seawater-derived microbial metagenomes. Table S2. Overview of the number and quality of MAGs obtained from octocoral- and seawater-derived microbial metagenome samples. Table S3. Clusters of Orthologous Groups of proteins (COGs) annotation of the 66 MAGs analysed in this study. Table S4. Results of the SIMPER test performed on COG profiles (Hellinger-transformed abundances; Euclidean distances) of the 66 MAGs grouped at order level. Table S5A. Absolute abundances (counts) of COG functions shown in Figure 4 that distinguished the 66 MAGs the most (based on SIMPER and Welch's tests). Table S5B. Relative abundances of COG functions shown in Figure 4 that distinguished the 66 MAGs the most (based on SIMPER and Welch's tests). Table S6A. Features of the endo-chitinase (EC 3.2.1.14) genes found on the 11 Endozoicomonadaceae MAGs of this study. Table S6B. Genes involved in chitin degradation present on the 11 Endozoicomonadaceae MAGs of this study and other, publicly available Endozoicomonadaceae genomes. Table S7. Amino acid (n= 20) and B vitamin (n = 8) biosynthesis capacities (based on genomic evidence) of the 11 bacterial species recovered from the microbiomes of healthy octocoral tissue. Table S8. Secondary metabolite biosynthetic gene clusters (SM-BGCs) present on the 66 MAGs, annotated using antiSMASH bacterial version 5.0. Table S9. List of SM-BGCs with some level of homology to MIBiG database entries.