We list both wall clock time and CPU time to show how effective is the code in utilizing multiple cores. Nucmer 4 is the fastest, but not the most memory efficient aligner. Nucmer3 failed to align hum
CSV file containing the phylogenetic reconstruction accuracy (Quartet and RF) and timing information for CONET simulated data for Lazac, Lazac-NJ, Sitka, WCND, MEDICC2, Hamming-NJ, and Rectilinear-NJ