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Observed and expected heterozygosity of the SNPs selected for validation.

Figshare2017-06-12 更新2026-04-29 收录

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Observed and expected heterozygosity of the SNPs selected for validation.

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创建时间：

2017-06-12

SNP验证

Sanger测序

From the ranked list of all SNPs predicted by Bubbleparse in contigs of over 200 nt, the top 48, as well as 16 from 25%, 50% and 75% down the list were tested with Sanger sequencing. This confirmed al

NIAID Data Ecosystem110

List and descriptive statistics of the 14 SNPs sufficient to distinguish the 783 genotypes.

SNP基因型

群体遗传多样性

Positions are denoted according to the PN40024 reference genome sequence (assembly version 12X.V0). Observed heterozygosity (Ho) and inbreeding coefficient (F) were calculated using PLINK software v1.

Figshare2018-02-09 更新50

Average observed heterozygosity (H O ), expected heterozygosity (H E ) and inbreeding coefficient (F IS ) per five P . peruviana subpopulations previously identified by ADMIXTURE.

群体遗传多样性

亚细胞结构分析

Average observed heterozygosity (HO), expected heterozygosity (HE) and inbreeding coefficient (FIS) per five P. peruviana subpopulations previously identified by ADMIXTURE.

NIAID Data Ecosystem40

Data from: A draft fur seal genome provides insights into factors affecting SNP validation and how to mitigate them

基因组学

SNP验证

Custom genotyping arrays provide a flexible and accurate means of genotyping single nucleotide polymorphisms (SNPs) in a large number of individuals of essentially any organism. However, validation r

DataONE2015-12-17 更新80

Additional file 16: Table S10. of An ultra-high-density map as a community resource for discerning the genetic basis of quantitative traits in maize

玉米遗传图谱

SNP验证

Verify the high quality SNPs between parents by using Sequenom MassARRAY. (XLSX 10 kb)

Figshare2016-12-14 更新40