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Short-read sequencing in Hr genome-editted mice

NIAID Data Ecosystem2026-03-14 收录

CRISPR编辑效率评估

小鼠物种比较基因组学

数据链接：

https://www.ncbi.nlm.nih.gov/sra/SRP394428 数据链接链接失效反馈

官方服务：

资源简介：

The study goal is to reveal CRISPR-Cas9 cutting efficiencies among eight different Mus musculus species.

应用场景：

创建时间：

2023-03-27

CRISPR编辑效率评估

微同源频率检测

Targeted deep sequencing to measure mutation frequency at the CRISPR-Cas9 induced double strand break site. Detection of microhomology frequency using CRISPRpic.

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NGS of gene using spCas9-SpG variants in rice

水稻基因编辑

CRISPR编辑效率评估

NGS of gene using spCas9-SpG variants in rice calli

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Amplicon sequencing of edited OpenCell alleles

CRISPR编辑效率评估

基因型分型

Amplicon sequencing of edited alleles from the OpenCell project. In this project, a split-mNeonGreen tag sequence (90nt) is inserted via CRISPR-based HDR (homology-directed repair) into protein-coding

NIAID Data Ecosystem00

CRISPResso: sequencing analysis toolbox for CRISPR genome editing

CRISPR编辑效率评估

靶向测序分析

Cells nucleofected with either CRISPR/Cas9 alone or with CRISPR/Cas9 and a homologous donor template were subjected to targeted high-throughput sequencing of the beta-globin locus. Here, one sample wi

NIAID Data Ecosystem50

CRISPResso: sequencing analysis toolbox for CRISPR genome editing. Homo sapiens

CRISPR编辑效率评估

基因修复途径定量分析

CRISPResso is a software pipeline for the analysis of targeted CRISPR-Cas9 deep sequencing data. This algorithm allows for the quantification of both non-homologous end joining (NHEJ) and homologous d

NIAID Data Ecosystem20

Short-read sequencing in Hr genome-editted mice

资源简介：

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