Anopheles coluzzii STARR-seq candidate enhancer catalog

NIAID Data Ecosystem2026-03-12 收录

蚊虫增强子鉴定

STARR-seq

数据链接：

https://figshare.com/articles/dataset/Anopheles_coluzzii_STARR-seq_candidate_enhancer_catalog/16709089 数据链接链接失效反馈

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资源简介：

BED file of A. coluzzii candidate enhancersA. gambiae PEST gff

创建时间：

2021-09-30

Identification of plant enhancers and their constituent elements by STARR-seq in tobacco leaves

植物增强子鉴定

STARR-seq

We developed a high-throughput assay in transiently transformed tobacco leaves that can identify enhancers, characterize their functional elements and detect condition-specific enhancer activity.

NIAID Data Ecosystem130

STARR-seq based mutagenesis of transcription factor binding sites. STARR-seq based mutagenesis of transcription factor binding sites

转录因子结合位点

STARR-seq

We performed a STARR-seq based, massively parallel reporter assay on reference genome and mutation-containing oligonucleotide sequences from regions associated with a large number of transcription fac

NIAID Data Ecosystem70

Additional file 6 of STARRPeaker: uniform processing and accurate identification of STARR-seq active regions

STARR-seq

基因组分析

Additional file 6: Supplementary Table S5. Sensitivity analysis of using alternative parameters against default parameters (bin 500 bp, step 100 bp, min 200 bp, max 1000 bp) using the HepG2 rep1 datas

DataCite Commons2024-02-14 更新70

STARR-seq enhancer activity in mouse embryonic stem cells cultured in 2i+LIF or serum+LIF [STARR-seq]

胚胎干细胞增强子

STARR-seq

Enhancers are distal regulators of gene expression that shape cell identity and regulate cell fate transitions. Mouse embryonic stem cells (mESCs) are a typical example of cells whose pluripotent iden

NIAID Data Ecosystem80

Additional file 19 of Constructing eRNA-mediated gene regulatory networks to explore the genetic basis of muscle and fat-relevant traits in pigs

STARR-seq

猪肉质性状遗传

Additional file 19: Table S10. The list of selected SNPs for STARR-seq experiments.

Figshare2024-08-18 更新70