Single cell RNA-seq data of microglia cells from normal mouse brain as well as in the context of neurodegenerative inhury models

Single cell RNA-seq data was obtained from FACS sorted microglia from different brain regions of normal 16 weeks old CD1 mice as well as from mice undergoing facial nerve axotomy or cuprizone treatment in order to elucidate microglia heterogeneity in a regional and disease model specific manner. 1920 cells total were sequenced with 3-4 replicate mice per condition. For normal tissue different brain regions from the same mice were obtained.