five

AntiSMASH and RAST Results for Diaminobutyricibacter sp. McL0608

收藏
Figshare2025-06-11 更新2026-04-28 收录
下载链接:
https://figshare.com/articles/dataset/AntiSMASH_and_RAST_Results_for_Diaminobutyricibacter_sp_McL0608/29178488
下载链接
链接失效反馈
官方服务:
资源简介:
Secondary metabolite clusters were predicted for Diaminobutyricibacter sp. McL0608 using antiSMASH v8.0.1 [1] and RAST [2].AntiSMASH:The AntiSMASH output can be found in the attached zip file, with the following predictions:RegionTypeFromToRegion 1NAPAA284,318318,280Region 2terpene610,384631,046Region 3terpene-precursor,betalactone,terpene,RiPP-like2,135,1842,194,481Region 4RiPP-like3,060,8033,071,117Region 5T3PKS4,091,6804,132,750RAST:The RAST output of the predicted genes can be found in the spreadsheet:RAST_Annotations_Diaminobutyricibacter_McL0608_SummaryWhich includes 2 predicted secondary metabolites, auxin synthesis and alkane biosynthesis.References:[1] Blin K, Shaw S, Vader L, Szenei J, Reitz ZL, Augustijn HE, Cediel-Becerra JDD, de Crécy-Lagard V, Koetsier RA, Williams SE, Cruz-Morales P, Wongwas S, Luchsinger AES, Biermann F, Korenskaia A, Zdouc MM, Meijer D, Terlouw BR, van der Hooft JJJ, Ziemert N, Helfrich EJN, Masschelein J, Corre C, Chevrette MG, van Wezel GP, Medema MH, Weber T. 2025. antiSMASH 8.0: extended gene cluster detection capabilities and analyses of chemistry, enzymology, and regulation. Nucl Acids Res https://doi.org/10.1093/nar/gkaf334[2] Brettin T, Davis JJ, Disz T, Edwards RA, Gerdes S, Olsen GJ, Olson R, Overbeek R, Parrello B, Pusch GD, Shukla M, Thomason JA, Stevens R, Vonstein V, Wattam AR, Xia F. 2015. RASTtk: a modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes. Scientific reports 5:8365 https://doi.org/10.1038/srep08365
创建时间:
2025-06-11
二维码
社区交流群
二维码
科研交流群
商业服务