Benchmarking microbial profilers on the CAMI data
收藏NIAID Data Ecosystem2026-05-01 收录
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https://zenodo.org/record/7923774
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资源简介:
Results in the CAMI format of testing various tools and reference databases.
Profilers used:
* mOTUs 3.0.3 (https://github.com/motu-tool/mOTUs)
* MetaPhlAn 4.0.3 (https://github.com/biobakery/MetaPhlAn)
* Bracken 2.8 (https://github.com/jenniferlu717/Bracken)
* KMA 1.4.7 (https://bitbucket.org/genomicepidemiology/kma)
For KMA, these different reference databases have been evaluated:
* Silva (20200116)
* Genomic (20220524)
* mOTUs db (20221205)
See https://github.com/genomicepidemiology/ava-tax-benchmark for details.
创建时间:
2023-07-03



