Benchmarking microbial profilers on the CAMI data
收藏NIAID Data Ecosystem2026-05-01 收录
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Results in the CAMI format of testing various tools and reference databases. Profilers used: * mOTUs 3.0.3 (https://github.com/motu-tool/mOTUs) * MetaPhlAn 4.0.3 (https://github.com/biobakery/MetaPhlAn) * Bracken 2.8 (https://github.com/jenniferlu717/Bracken) * KMA 1.4.7 (https://bitbucket.org/genomicepidemiology/kma) For KMA, these different reference databases have been evaluated: * Silva (20200116) * Genomic (20220524) * mOTUs db (20221205) See https://github.com/genomicepidemiology/ava-tax-benchmark for details.
创建时间:
2023-07-03



