Single-cell transcriptomics of bronchoalveolar lavage reveals divergent macrophage subpopulations and trajectories in interstitial lung disease

Name: Single-cell transcriptomics of bronchoalveolar lavage reveals divergent macrophage subpopulations and trajectories in interstitial lung disease
Creator: Zenodo
Published: 2026-05-05 04:43:12
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DataCite Commons2026-05-05 更新2026-05-07 收录

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https://zenodo.org/doi/10.5281/zenodo.15339000

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This repository contains the preprocessed single-cell RNA data from the manuscript Single-cell transcriptomics of bronchoalveolar lavage reveals divergent macrophage subpopulations and trajectories in interstitial lung disease (Zhang & Allen et al. PLOS ONE 2026). Data Descriptions: BAL_FINAL.rds Seurat Object with the entire dataset BAL_FINAL.h5ad Scanpy Object with the entire dataset BAL_FINAL_META.txt Metadata for each cell mlm_umap_embeddings.csv UMAP embeddings for the monocyte-derived clusters mlm_cluster_metadata.csv Monocyte-derived macrophage metadata monomacs_only.rds Seurat Object with monocyte-like macrophages (MLMs) ipf_allen2022.full_score.gz scDRS results for each cell using the Richard Allen et al. 2022 IPF GWAS summary statistics

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Zenodo

创建时间：

2025-05-05