five

Validation Benchmark Study F1000-Research (Data)

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Figshare2025-03-14 更新2026-04-28 收录
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https://figshare.com/articles/dataset/Validation_Benchmark_Study_F1000-Research_Data_/28596398
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Analysis results and data used to perform the benchmarking study entitled as R data objects.Leveraging Synthetic Data to Validate a Benchmark Study for Differential Abundance Tests for 16S Microbiome Sequencing DataThe study protocol is the following:Kohnert, E., & Kreutz, C. (2025). Computational study protocol: leveraging synthetic data to validate a benchmark study for differential abundance tests for 16s microbiome sequencing data. F1000Research, 13, 1180. https://f1000research.com/articles/13-1180The code used to generate this is available at https://github.com/kreutz-lab/ValidationBenchmarkStudyF1000Each RDS file contains the so called data_to_compare object, which is a hirarchical list object containing the experimental data, simualted data, results of the DA analyses as well as other calculations and information. Some information is only available in a compressed form. Use bs_decompress() from our github repository for de-compression.
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2025-03-14
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