Data from "Tissue and toxin-specific divergent evolution in plant defense"

Files and code necessary to replicate the results from the manuscript are described as follows:

Syrfampop.sas --> SAS code to conduct the analyses.
HPLC_asyr.csv --> contains the cardenolide data of root, leaf and seed tissue from each individual plant belonging to multiple families of each of the two populations (main analysis in SAS code).
chemmantelcorr.csv --> contains the correlation matrices between cardenolides within a given tissue (permutation test in SAS code)
SS.csv --> contains the sums of squares matrices of cardenolide concentrations at the population and family levels for each tissue and whole plant after the MANOVA in the SAS code (used for the R code in Martin et al. (2008)).
ehdbp.vcf --> Description of SNP data used for this study.
ehdbp.arp --> SNP data in Arlequin format ready for FST analysis.