Supplementary Material.zip

Supplementary Figure 1 | Genes that presented three types of AS events (CCDC51, PIK3CG, MCEMP1, STRADA, and ATP2A3). Supplementary Figure 2 | SNP annotation results from ensemble VEP. Supplementary Table 1 | Information of healthy cows and subclinical mastitis cows. Supplementary Table 2 | The list of DEGs and DELs. Supplementary Table 3 | Pathway of DEGs and DELs. Supplementary Table 4 | Target genes of lncRNAs. Supplementary Table 5 | Co-expression network of LncRNAs, target genes, and key pathways. Supplementary Table 6 | The list of DELs adjacent to SCC, SCS, and white blood cell count QTLs. Supplementary Table 7 | all AS events. Supplementary Table 8 | The list of 1,621个DSGs. AS SNPs from VEP annotator.