LMAS Test Dataset - BMock12 Community Standards

The twelve bacterial replicons of the BMock12 Community Standards were used as reference. It includes the following strains: Species Sample ID Depth of Coverage (x) Muricauda sp. ES.050 2615840527 618,758 Thioclava sp. ES.032 2615840533 78,318 Cohaesibacter sp. ES.047 2615840601 170,586 Propionibacteriaceae bacterium 2615840646 31,902 Marinobacter sp. LV10R510-8 2615840697 447,834 Marinobacter sp. LV10MA510-1 2616644829 135,05 Psychrobacter sp. LV10R520-6 2617270709 425,472 Micromonospora echinaurantiaca 2623620557 14,912 Micromonospora echinofusca 2623620567 18,192 Micromonospora coxensis 2623620609 0,02 Halomonas sp. HL-4 2623620617 507,08 Halomonas sp. HL-93 2623620618 579,874 The raw sequence data of the mock communities, with an even distribution of species, is available at: SRR8073716 For the sake of a less resource-intense evaluation we downsampled to have 20% of the reads available in the original sample and further processed only these. The main challenges of this data set are possibly to assemble the genomes of the three <em>Micromonospora</em> spp. and the two <em>Halomonas</em> spp. strains, which have an ANIb &gt;0.84 and 0.98, respectively. The two <em>Marinobacter</em> spp. have an ANIb of 0.78.