The data economy of public proteomics over thirteen years of PRIDE: data and code

Data and code for an analysis of the 36,249 public PRIDE datasets released in 2013–2025. Source-metadata.zip: frozen source tables used to reconstruct the analysis. Extraction-caches.zip: recovered archive listings and table headers retrieved on 11–12 October 2026. pride-data-economy-code.zip: analysis and figure code, frozen derived inputs, reference tables and validation records (snapshot of the GitHub repository). The README gives the reproduction steps. Figures-600dpi.zip: the 19 numbered figures at 600 dpi. Code is MIT; author-created data and figures are CC BY 4.0. Source-derived records keep the rights of their original contributors. SHA256SUMS lists the checksums of the four archives.