Viral transcript counts from 3SEQ in 17syn+-, 17ΔN/H-, m2kb-S-, and 17-37-infected skin in vivo and cultured skin explants.

3SEQ was performed on 17syn+-, 17ΔN/H-, m2kb-S-, and 17-37-infected xenografts and cultured skin explants (ex vivo). Viral transcript abundances are reported as transcripts per thousand (TPT; described in the RNA-seq methods). The lambda phage insertion in the 17ΔN/H genome was manually added to the analysis to identify any unknown polyadenylated transcripts arising due to the insertion, but none were found. The sample data were deposited in NLM BioProject: PRJNA338711 and the SRA repository FASTQ file name for each sample is given. Codes E1-3 for explants and G5, 6, 7, and 11 for xenografts were used to indicate individual skin donors. (XLSX)