Additional file 1: Table S1. of The pepper virome: natural co-infection of diverse viruses and their quasispecies

Summary of de novo-assembled transcriptomes for two libraries using Trinity program. Table S2. Summary of MEGABLAST results to identify virus-associated contigs from PJ transcriptome. Table S3. Summary of MEGABLAST results to identify virus-associated contigs from TW transcriptome. Table S4. Summary of identified viruses in PJ and TW transcriptomes with numbers of associated viral contigs. Table S5. Single nucleotide variations of BPEV in the PJ transcriptome. Table S6. Single nucleotide variations of BPEV in the TW transcriptome. Table S7. Single nucleotide variations of PepVA in the PJ transcriptome. Table S8. Single nucleotide variations of PepVA in the TW transcriptome. Table S9. Single nucleotide variations of ChiLCV DNA-A in the PJ transcriptome. Table S10. Single nucleotide variations of ChiLCV DNA-A in the TW transcriptome. Table S11. Single nucleotide variations of PepLCV betasatellite in the PJ transcriptome. Table S12. Single nucleotide variations of PepLCV betasatellite in the TW transcriptome. Table S13. Single nucleotide variations of CYVMV alphasatellite in the PJ transcriptome. Table S14. Single nucleotide variations of CYVMV alphasatellite in the TW transcriptome. Table S15. Number of viral sequence reads and copy number for identified viruses. (XLSX 131 kb)